Functional Data Workshop - Copenhagen, 22-26 September
2008
James
Ramsay, McGill University
Note: This page will be updated frequently so please come back and visit it often...
Contents
Workshop outline:
The first four
days consists of a course held by Jim Ramsay, McGill University, Canada.
The lectures will intersperse case studies with discussions of statistical and
mathematical issues. The case studies aim to show the range of applications
possible, show what insights might be gained from using FDA methods, and
illustrate the challenges that are specific or particularly relevant to the
analysis functional data. Case studies
are not “how to” sessions, but rather address questions like, “Why should I
consider this approach?” and “What should I watch out for?” During the course
there will be several practical sessions using R.
The first two days will be oriented to the motivation
and the preliminaries of functional data analysis:
- What are functional data?
- How should they be prepared for analysis?
- How do we convert discrete noisy data to smooth functions?
- What data exploration tools are useful?
- Do the data display both phase and amplitude variation?
- What about principal components analysis and other exploratory
methods?
The second two days will be primarily given
over to linear models for functional data and to the modeling of dynamic
systems. These are vast topics, and includes relatively basic topics like functional
versions of analysis of variance and regression analysis and as well as issues
less familiar to statisticians such as how differential equations can be used
to model functional data. All approaches
assume that the goal is to explain variation in one or more response variables
by variation in one or more input or independent variables where, naturally, at
least one of the variables involved is functional. A detailed program is given
below.
The last day of the workshop is dedicated to a small research
workshop which aims at bringing people together to present some FDA related
problems/topics for an open discussion. Please follow this link for details (and please notice that you shold sign up for this workshop separately).
Preparing for the workshop:
Please look at the material provided under Resources
before the workshop. The practicals will be based on R. You are requested to bring your own laptop with
the most recent version of R installed together with the R packages fda, spline, doBy and lattice.
Audience:
The workshop is designed to provide
something of value to as wide a range of participants as possible, ranging from
those interested in whether FDA might prove useful in their research, to
statistical methodologists looking for research problems and interested in new
techniques. Ph.D. students are especially
welcome!
Location:
The first 4 days will take place at University of
Copenhagen, Institute of Public Health, Østre Farimagsgade 5,
DK-1014, Copenhagen K (room 2.0.18). The last day will
take place at University of Copenhagen, Faculty of Life Sciences, Thorvaldsensvej 40, Frederiksberg (Auditorium 3-14)
Organizer:
The workshop is organized by the Danish
Graduate School of Biostatistics. Course director is Søren Højsgaard (sorenh@agrsci.dk)
Sign
up:
Participation in the
workshop is free and space is allotted on a first-come-first-serve basis. To
sign up for the workshop, please send an email to Søren Højsgaard (sorenh@agrsci.dk) no later than June 20,
2008.
Detailed program
The
course runs from 9am to 4 pm Monday to Thursday. We might choose to
leave an afternoon off, but that and a fully detailled program will not
be decided until Sunday September 21. when Jim Ramsay and Søren
Højsgaard meet in Copenhagen.
Days 1 and 2.
Preliminaries and data exploration
Day 1:
- Introduction to the workshop
- R-preliminaries
- An introduction to Functional Data Analysis. Slides Movies
- Studying human growth
- Canadian weather
- Non-durable goods
- From functional data to smooth functions. Slides Movies
- Basis basics
- Methods
for representing functions
- Data smoothing with roughness penalties
Day 2:
- Spiegel-im-spiegel and FDA: The
dynamics of music appreciation
- Constrained optimization
- Curve registration
- Montreal weather: Separating
phase from amplitude variation
- Chinese handwriting
Day 3:
- Functional principal components analysis
- Canonical correlation analysis
- An overview of functional linear models
- Mouse livers: Modeling an input/output system
Day 4:
- Modeling dynamics: Some
examples from engineering and medicine
- A differential equation for the analysis and recognition of
handwriting
- Analyzing lupus data:
fitting a differential equation to complex dynamics
- Resources: web sites,
books, data, and software
- Wrap-up: Themes and Challenges.
Resources:
Notice: No copies of course material will be handed out. Instead, it is
suggested that you download the following to your computer prior
to arrival:
Data from this paper will play a role in the workshop so we suggest that you familiarize yourself with the paper.
Two main books on the subject are:
- Ramsay, J. O. and Silverman, B. W. (1997) Functional Data Analysis. New York: Springer.
- Ramsay, J. O. and Silverman, B. W. (2002) Applied Functional Data
Analysis. New York:
Springer. (A book of case studies).
Additional material:
Participants:
| Name |
Affiliation |
E-mail |
| Ulrich Halekoh |
University of Aarhus |
ulrich.halekoh@agrsci.dk |
| Søren Feodor Nielsen |
University of Copenhagen |
feodor@math.ku.dk |
| Ewelina Kotwa |
Technical University of Denmark |
ek@imm.dtu.dk |
| Torben Martinussen |
University of Copenhagen |
tma@life.ku.dk |
| Ann Hamilton Newstead |
The University of Texas Health Science Center at
San Antonio
|
NEWSTEAD@uthscsa.edu |
| Stina Frosch |
Technical University of Denmark |
sfr@aqua.dtu.dk |
| Claus Ekstrøm |
University of Copenhagen |
claus@ekstroem.dk |
| Klaus K. Holst |
University of Copenhagen |
kkho@biostat.ku.dk |
| Stina West Andersen |
Novo Nordisk |
swa@novonordisk.com |
| Marius Cosmin Codrea |
University of Aarhus |
Marius.Codrea@agrsci.dk
|
| Bo Markussen |
University of Copenhagen |
bomar@life.ku.dk |
| Henrik Wachmann |
Larix |
hew@LARIX.dk |
| Jared O'Connell |
University of Aarhus |
Jared.OConnell@agrsci.dk |
| Flemming Skjøth |
AgroTech |
fls@agrotech.dk |
| Philipp Trenél |
AgroTech |
pht@agrotech.dk |
| Nicolas C. Friggens |
University of Aarhus |
N.Friggens@agrsci.dk |
| Olivier Martin |
INRA-AgroParisTech |
omartin@agroparistech.fr |
| João Fadista |
University of Aarhus |
Joao.Fadista@agrsci.dk |
| Brian Parker |
Copenhagen University
|
bparker@binf.ku.dk |
| Jean Wen |
Copenhagen University |
jeanwen@binf.ku.dk |
Tommaso Bianco
|
Paris VI University |
Tommaso.Bianco@ircam.fr |
| Søren Højsgaard |
University of Aarhus |
sorenh@agrsci.dk |
| Ib Skovgaard |
University of Copenhagen |
ims@life.ku.dk |
| Patricia Shewokis |
Drexel University |
pas38@drexel.edu |
| Lars Eckfeldt |
Technische Universitaet Dresden |
Lars.Eckfeldt@tu-dresden.de |
| Jeremy Silver |
University of Copenhagen |
J.Silver@biostat.ku.dk |
| Martie Muller |
Institute for Maritime Technology in South Africa |
mm@imt.co.za |
Anders Tolver Jensen
|
University of Copenhagen |
tolver@life.ku.dk |
| Helle Sørensen |
University of Copenhagen |
helle@dina.kvl.dk |
| Rune Schjellerup Philosof |
University of Southern Denmark |
rphilosof@health.sdu.dk |
| Sannie Vester Thorsen |
Det Nationale
Forskningscenter for Arbejdsmiljø |
svt@arbejdsmiljoforskning.dk |
ulrich.halekoh@agrsci.dk; feodor@math.ku.dk; ek@imm.dtu.dk;
tma@life.ku.dk; fredea.togersen@agrsci.dk; sfr@aqua.dtu.dk;
jbj@arbejdsmiljoforskning.dk; claus@ekstroem.dk; kkho@biostat.ku.dk;
swa@novonordisk.com; JHjelmborg@health.sdu.dk; Marius.Codrea@agrsci.dk;
bomar@life.ku.dk; hew@LARIX.dk; Jared.OConnell@agrsci.dk;
fls@agrotech.dk; pht@agrotech.dk; N.Friggens@agrsci.dk;
omartin@agroparistech.fr; Joao.Fadista@agrsci.dk; bparker@binf.ku.dk;
jeanwen@binf.ku.dk; Tommaso.Bianco@ircam.fr; sorenh@agrsci.dk;
ims@life.ku.dk;